IL1RN-001 – Gene and variation information

LGM variation ID →
IL1RN-001
LGM-FO-UNAM DATA INFORMATION
NCBI dbSNP ID (ss#): Pending
Population count: 7
View population information View population data
GENE INFORMATION
NCBI gene ID: 3557
NCBI release: 107 (13-03-2015)
Species: Homo sapiens
Molecule type: Genomic DNA
Symbol: IL1RN
Official name: interleukin 1 receptor antagonist
Type: Protein coding
Size (kbp): 34.652
Chromosome (chr): chr2
Chromosome location: 2q14.2
VARIATION INFORMATION
Reference NCBI dbSNP ID (rs#): rs2234663
NCBI dbSNP Build: 130
Class: STR (short tandem repeat) polymorphism
Type: Non-coding
Full description: IL1RN{NM_173841.1}:g.12637_12722(2_6)
Abbreviated description: IL1RN:g.12637_12722(2_6)
Synonyms: IL1RN int2, IL1RN_STR(int 2)
Location: Intron 2 (isoform 1), intron 4 (isoform 2)
Chromosome position: 113,604,577
Contig position: 2,596,029
5′ Flanking sequence (30bp): GCAACACTCCTATTGACCTGGAGCACAGGT
Alleles: (ATCCTGGGGAAAGTGAGGGAAATATGGACA

TCACATGGAACAACATCCAGGAGACTCAGGCC

TCTAGGAGTAACTGGGTAGTGTGC) 2/3/4/5/6, 86bp repeat

3′ Flanking sequence (30bp): ATCCTGGGGAAAGTGAGGGAAATATGGACA

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